Hop stunt viroid: Effect on Host (Humulus lupulus) Transcriptome and Its Interactions With Hop Powdery Mildew (Podospheara macularis).
Identifieur interne : 000087 ( Main/Exploration ); précédent : 000086; suivant : 000088Hop stunt viroid: Effect on Host (Humulus lupulus) Transcriptome and Its Interactions With Hop Powdery Mildew (Podospheara macularis).
Auteurs : Madhu Kappagantu [États-Unis] ; Jeff M. Bullock [États-Unis] ; Mark E. Nelson [États-Unis] ; Kenneth C. Eastwell [États-Unis]Source :
- Molecular plant-microbe interactions : MPMI [ 0894-0282 ] ; 2017.
Descripteurs français
- KwdFr :
- Analyse de profil d'expression de gènes (MeSH), Ascomycota (croissance et développement), Ascomycota (physiologie), Feuilles de plante (virologie), Gènes de plante (MeSH), Humulus (génétique), Humulus (microbiologie), Humulus (virologie), Interactions hôte-pathogène (génétique), Maladies des plantes (microbiologie), Maladies des plantes (virologie), Reproductibilité des résultats (MeSH), Séquençage nucléotidique à haut débit (MeSH), Transcriptome (génétique), Virus des plantes (pathogénicité).
- MESH :
- croissance et développement : Ascomycota.
- génétique : Humulus, Interactions hôte-pathogène, Transcriptome.
- microbiologie : Humulus, Maladies des plantes.
- pathogénicité : Virus des plantes.
- physiologie : Ascomycota.
- virologie : Feuilles de plante, Humulus, Maladies des plantes.
- Analyse de profil d'expression de gènes, Gènes de plante, Reproductibilité des résultats, Séquençage nucléotidique à haut débit.
English descriptors
- KwdEn :
- Ascomycota (growth & development), Ascomycota (physiology), Gene Expression Profiling (MeSH), Genes, Plant (MeSH), High-Throughput Nucleotide Sequencing (MeSH), Host-Pathogen Interactions (genetics), Humulus (genetics), Humulus (microbiology), Humulus (virology), Plant Diseases (microbiology), Plant Diseases (virology), Plant Leaves (virology), Plant Viruses (pathogenicity), Reproducibility of Results (MeSH), Transcriptome (genetics).
- MESH :
- genetics : Host-Pathogen Interactions, Humulus, Transcriptome.
- growth & development : Ascomycota.
- microbiology : Humulus, Plant Diseases.
- pathogenicity : Plant Viruses.
- physiology : Ascomycota.
- virology : Humulus, Plant Diseases, Plant Leaves.
- Gene Expression Profiling, Genes, Plant, High-Throughput Nucleotide Sequencing, Reproducibility of Results.
Abstract
Viroids are the smallest known plant pathogens that exploit host systems for their replication and cause diseases in many hosts. In this study, the host response of hop plants to Hop stunt viroid (HSVd) infection was studied through transcriptome analysis. RNA sequence analysis of hop leaves infected with HSVd revealed dynamic changes in hop gene expression. Defense-related genes and genes involved in lipid and terpenoid metabolism are the major categories that showed differential expression due to HSVd infection. Additionally, the effect of HSVd on development of hop powdery mildew (Podospheara macularis) (HPM) was studied. Transcriptome analysis followed by quantitative reverse transcription-polymerase chain reaction analysis showed that transcript levels of pathogenesis-related (PR) genes such as PR protein 1, chitinase, and thaumatin-like protein genes are induced in leaves infected with HPM alone. The response in these genes to HPM is significantly down-regulated in leaves with HSVd-HPM mixed infection. These results confirm that HSVd alters host metabolism, physiology, and plant defense responses. Nevertheless, in detached leaf assays, HPM consistently expanded faster on HSVd-negative leaves relative to HSVd-positive leaves. Although HSVd infection suppresses elements associated with the host immunity response, infection by HSVd is antagonistic to HPM infection of hops.
DOI: 10.1094/MPMI-03-17-0071-R
PubMed: 28703029
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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In this study, the host response of hop plants to Hop stunt viroid (HSVd) infection was studied through transcriptome analysis. RNA sequence analysis of hop leaves infected with HSVd revealed dynamic changes in hop gene expression. Defense-related genes and genes involved in lipid and terpenoid metabolism are the major categories that showed differential expression due to HSVd infection. Additionally, the effect of HSVd on development of hop powdery mildew (Podospheara macularis) (HPM) was studied. Transcriptome analysis followed by quantitative reverse transcription-polymerase chain reaction analysis showed that transcript levels of pathogenesis-related (PR) genes such as PR protein 1, chitinase, and thaumatin-like protein genes are induced in leaves infected with HPM alone. The response in these genes to HPM is significantly down-regulated in leaves with HSVd-HPM mixed infection. These results confirm that HSVd alters host metabolism, physiology, and plant defense responses. Nevertheless, in detached leaf assays, HPM consistently expanded faster on HSVd-negative leaves relative to HSVd-positive leaves. Although HSVd infection suppresses elements associated with the host immunity response, infection by HSVd is antagonistic to HPM infection of hops.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28703029</PMID><DateCompleted><Year>2018</Year><Month>06</Month><Day>12</Day></DateCompleted><DateRevised><Year>2018</Year><Month>06</Month><Day>12</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0894-0282</ISSN><JournalIssue CitedMedium="Print"><Volume>30</Volume><Issue>10</Issue><PubDate><Year>2017</Year><Month>10</Month></PubDate></JournalIssue><Title>Molecular plant-microbe interactions : MPMI</Title><ISOAbbreviation>Mol Plant Microbe Interact</ISOAbbreviation></Journal><ArticleTitle>Hop stunt viroid: Effect on Host (Humulus lupulus) Transcriptome and Its Interactions With Hop Powdery Mildew (Podospheara macularis).</ArticleTitle><Pagination><MedlinePgn>842-851</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1094/MPMI-03-17-0071-R</ELocationID><Abstract><AbstractText>Viroids are the smallest known plant pathogens that exploit host systems for their replication and cause diseases in many hosts. In this study, the host response of hop plants to Hop stunt viroid (HSVd) infection was studied through transcriptome analysis. RNA sequence analysis of hop leaves infected with HSVd revealed dynamic changes in hop gene expression. Defense-related genes and genes involved in lipid and terpenoid metabolism are the major categories that showed differential expression due to HSVd infection. Additionally, the effect of HSVd on development of hop powdery mildew (Podospheara macularis) (HPM) was studied. Transcriptome analysis followed by quantitative reverse transcription-polymerase chain reaction analysis showed that transcript levels of pathogenesis-related (PR) genes such as PR protein 1, chitinase, and thaumatin-like protein genes are induced in leaves infected with HPM alone. The response in these genes to HPM is significantly down-regulated in leaves with HSVd-HPM mixed infection. These results confirm that HSVd alters host metabolism, physiology, and plant defense responses. Nevertheless, in detached leaf assays, HPM consistently expanded faster on HSVd-negative leaves relative to HSVd-positive leaves. Although HSVd infection suppresses elements associated with the host immunity response, infection by HSVd is antagonistic to HPM infection of hops.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kappagantu</LastName><ForeName>Madhu</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Washington State University-IAREC, 24106 N Bunn Road, Prosser 99350, WA, U.S.A.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bullock</LastName><ForeName>Jeff M</ForeName><Initials>JM</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Washington State University-IAREC, 24106 N Bunn Road, Prosser 99350, WA, U.S.A.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Nelson</LastName><ForeName>Mark E</ForeName><Initials>ME</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Washington State University-IAREC, 24106 N Bunn Road, Prosser 99350, WA, U.S.A.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Eastwell</LastName><ForeName>Kenneth C</ForeName><Initials>KC</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Washington State University-IAREC, 24106 N Bunn Road, Prosser 99350, WA, U.S.A.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>WNP00754</GrantID><Agency>USDA</Agency><Country>International</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>08</Month><Day>23</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Mol Plant Microbe Interact</MedlineTA><NlmUniqueID>9107902</NlmUniqueID><ISSNLinking>0894-0282</ISSNLinking></MedlineJournalInfo><SupplMeshList><SupplMeshName Type="Organism" UI="C000623745">Hop stunt viroid</SupplMeshName></SupplMeshList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001203" MajorTopicYN="N">Ascomycota</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020869" MajorTopicYN="N">Gene Expression Profiling</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D059014" MajorTopicYN="N">High-Throughput Nucleotide Sequencing</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D054884" MajorTopicYN="N">Host-Pathogen Interactions</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D027582" MajorTopicYN="N">Humulus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010942" MajorTopicYN="N">Plant Viruses</DescriptorName><QualifierName UI="Q000472" MajorTopicYN="Y">pathogenicity</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015203" MajorTopicYN="N">Reproducibility of Results</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D059467" MajorTopicYN="N">Transcriptome</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>7</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>6</Month><Day>13</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>7</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28703029</ArticleId><ArticleId IdType="doi">10.1094/MPMI-03-17-0071-R</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Washington (État)</li></region></list><tree><country name="États-Unis"><region name="Washington (État)"><name sortKey="Kappagantu, Madhu" sort="Kappagantu, Madhu" uniqKey="Kappagantu M" first="Madhu" last="Kappagantu">Madhu Kappagantu</name></region><name sortKey="Bullock, Jeff M" sort="Bullock, Jeff M" uniqKey="Bullock J" first="Jeff M" last="Bullock">Jeff M. Bullock</name><name sortKey="Eastwell, Kenneth C" sort="Eastwell, Kenneth C" uniqKey="Eastwell K" first="Kenneth C" last="Eastwell">Kenneth C. Eastwell</name><name sortKey="Nelson, Mark E" sort="Nelson, Mark E" uniqKey="Nelson M" first="Mark E" last="Nelson">Mark E. Nelson</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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